Name:
Adduct:
Polarity:
Z:
m/z:
±:
CCS: Å2
±: %
SMI:
Type:

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1
May, J. C. et al. Conformational Ordering of Biomolecules in the Gas Phase: Nitrogen Collision Cross Sections Measured on a Prototype High Resolution Drift Tube Ion Mobility-Mass Spectrometer. Anal. Chem. 86, 2107–2116 (2014).


2
Paglia, G. et al. Ion Mobility Derived Collision Cross Sections to Support Metabolomics Applications. Anal. Chem. 86, 3985–3993 (2014).


3
Groessl, M., Graf, S. & Knochenmuss, R. High resolution ion mobility-mass spectrometry for separation and identification of isomeric lipids. Analyst 140, 6904–6911 (2015).


4
Zhou, Z., Shen, X., Tu, J. & Zhu, Z.-J. Large-Scale Prediction of Collision Cross-Section Values for Metabolites in Ion Mobility-Mass Spectrometry. Anal. Chem. 88, 11084–11091 (2016).


5
Hines, K. M., Herron, J. & Xu, L. Assessment of altered lipid homeostasis by HILIC-ion mobility-mass spectrometry-based lipidomics. The Journal of Lipid Research 58, 809–819 (2017).


6
Bijlsma, L. et al. Prediction of Collision Cross-Section Values for Small Molecules: Application to Pesticide Residue Analysis. Anal. Chem. 89, 6583–6589 (2017).


7
Hines, K. M., Ross, D. H., Davidson, K. L., Bush, M. F. & Xu, L. Large-Scale Structural Characterization of Drug and Drug-Like Compounds by High-Throughput Ion Mobility-Mass Spectrometry. Anal. Chem. 89, 9023–9030 (2017).


8
Stow, S. M. et al. An Interlaboratory Evaluation of Drift Tube Ion Mobility–Mass Spectrometry Collision Cross Section Measurements. Anal. Chem. 89, 9048–9055 (2017).


9
Zhou, Z., Tu, J., Xiong, X., Shen, X. & Zhu, Z.-J. LipidCCS: Prediction of Collision Cross-Section Values for Lipids with High Precision To Support Ion Mobility–Mass Spectrometry-Based Lipidomics. Anal. Chem. 89, 9559–9566 (2017).


10
Zheng, X. et al. A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry. Chem. Sci. 8, 7724–7736 (2017).


11
Hines, K. M. et al. Characterization of the Mechanisms of Daptomycin Resistance among Gram-Positive Bacterial Pathogens by Multidimensional Lipidomics. mSphere 2, 99–16 (2017).


12
Lian, R. et al. Ion mobility derived collision cross section as an additional measure to support the rapid analysis of abused drugs and toxic compounds using electrospray ion mobility time-of-flight mass spectrometry. Anal. Methods 10, 749–756 (2018).


13
Mollerup, C. B., Mardal, M., Dalsgaard, P. W., Linnet, K. & Barron, L. P. Prediction of collision cross section and retention time for broad scope screening in gradient reversed-phase liquid chromatography-ion mobility-high resolution accurate mass spectrometry. Journal of Chromatography A 1542, 82–88 (2018).


14
Righetti, L. et al. Ion mobility-derived collision cross section database: Application to mycotoxin analysis. Analytica Chimica Acta 1014, 50–57 (2018).


15
Tejada-Casado, C. et al. Collision cross section (CCS) as a complementary parameter to characterize human and veterinary drugs. Analytica Chimica Acta 1043, 52–63 (2018).


16
Nichols, C. M. et al. Untargeted Molecular Discovery in Primary Metabolism: Collision Cross Section as a Molecular Descriptor in Ion Mobility-Mass Spectrometry. Anal. Chem. 90, 14484–14492 (2018).


17
Hines, K. M. & Xu, L. Lipidomic consequences of phospholipid synthesis defects in Escherichia coli revealed by HILIC-ion mobility-mass spectrometry. Chemistry and Physics of Lipids 219, 15–22 (2019).


18
Leaptrot, K. L., May, J. C., Dodds, J. N. & McLean, J. A. Ion mobility conformational lipid atlas for high confidence lipidomics. Nature Communications 1–9 (2019).


19
Blaženović, I. et al. Increasing Compound Identification Rates in Untargeted Lipidomics Research with Liquid Chromatography Drift Time–Ion Mobility Mass Spectrometry. Anal. Chem. 90, 10758–10764 (2018).


20
Vasilopoulou, C. G. et al. Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts. Nature Communications 1–11 (2020).


21
Tsugawa, H. et al. MS-DIAL 4: accelerating lipidomics using an MS/MS, CCS, and retention time atlas. bioRxiv 37, 513 (2020).


22
Poland, J. C. et al. Collision Cross Section Conformational Analyses of Bile Acids via Ion Mobility–Mass Spectrometry. Journal of the American Society for Mass Spectrometry 31, 1625–1631 (2020).


23
Dodds, J. et al. Rapid Characterization of Per- and Polyfluoroalkyl Substances (PFAS) by Ion Mobility Spectrometry−Mass Spectrometry (IMS-MS). Anal. Chem. 92, 4427-4435 (2020).


24
Celma, A. et al. Improving Target and Suspect Screening High-Resolution Mass Spectrometry Workflows in Environmental Analysis by Ion Mobility Separation. Environ. Sci. Technol. 54, 15120-15131 (2020)


25
Belova, L. et al. Ion Mobility-High-Resolution Mass Spectrometry (IM-HRMS) for the Analysis of Contaminants of Emerging Concern (CECs): Database Compilation and Application to Urine Samples. Anal. Chem. XXX, XXXX-XXXX (2021)


26
Ross, D. H., et al. High-Throughput Measurement and Machine Learning-Based Prediction of Collision Cross Sections for Drugs and Drug Metabolites. J Am Soc Mass Spectr 33, 1061–1072 (2022).


ID Name Adduct Structure m/z CCS SMI Type Z Ref CCS Type CCS method
CCSBASE_52D13005F6 Trimedlure [M+K]+ 271.0867 154.0 CC1CC(CCC1C(=O)OC(C)(C)C)Cl small molecule 1 26 DT single field, calibrated
CCSBASE_DB0CB87FAC Trimedlure [M+H-H2O]+ 215.1202 143.8 CC1CC(CCC1C(=O)OC(C)(C)C)Cl small molecule 1 26 DT single field, calibrated
CCSBASE_01C5FA3895 2-mercaptobenzothiazole_met003 [M+Na]+ 382.0031 175.2 O=C(O)C1OC(Oc2ccc3nc(S)sc3c2)C(O)C(O)C1O small molecule 1 26 DT single field, calibrated
CCSBASE_A550ADD145 2-5-di-t-butyl-4-hydroxyanisole_met010 [M+Na]+ 435.1995 199.8 COc1cc(C(C)(C)C)c(OC2OC(C(=O)O)C(O)C(O)C2O)cc1C(C)(C)C small molecule 1 26 DT single field, calibrated
CCSBASE_643EE88B15 2-5-di-t-butyl-4-hydroxyanisole_met010 [M+K]+ 451.1734 201.4 COc1cc(C(C)(C)C)c(OC2OC(C(=O)O)C(O)C(O)C2O)cc1C(C)(C)C small molecule 1 26 DT single field, calibrated
CCSBASE_912DBF1601 4'-demethylepipodophyllotoxin_met024 [M+H]+ 373.0923 147.6 O=C1OC[C@@H]2[C@H](O)c3cc4c(cc3[C@@H](c3cc(O)c(O)c(O)c3)[C@@H]12)OCO4 small molecule 1 26 DT single field, calibrated
CCSBASE_7FAE2E068C 7-nitroindazole_met009 [M+Na]+ 214.0593 138.1 CC(=O)ONc1cccc2c[nH]nc12 small molecule 1 26 DT single field, calibrated
CCSBASE_92AC8B9F6F 7-nitroindazole_met015 [M+Na]+ 362.0601 172.8 O=C(O)C1OC(n2ncc3cccc([N+](=O)[O-])c32)C(O)C(O)C1O small molecule 1 26 DT single field, calibrated
CCSBASE_3FA7A82EA4 Ethoxyquin_met011 [M+H]+ 190.1232 142.0 CC1=CC(C)(C)Nc2ccc(O)cc21 small molecule 1 26 DT single field, calibrated
CCSBASE_8E5127EA2E Famprofazone_met030 [M+H]+ 245.129 153.2 CC(C)c1c(C=O)n(C)n(-c2ccccc2)c1=O small molecule 1 26 DT single field, calibrated
1 2 ... 1695 1696 1697 1698 1699